scPerturb

Harmonized single-cell perturbation data

This project includes a database of annotation harmonized single-cell perturbation datasets and a deep dive on energy statistics as a tool for quantifying perturbation similarity and defining distinguishable cell states.

scPerturb for more on the data

NeurIPS LMRL poster from November 22.

Updated publication provisionally accepted at Nature Methods.

References

2022

  1. scPerturb: Harmonized Single-Cell Perturbation Data
    Stefan Peidli, Tessa D Green, Ciyue Shen, and 8 more authors
    bioRxiv, 2022